{"$schema":"https://verifymcp.io/schemas/trust-report.json","schemaVersion":1,"license":{"name":"CC BY-NC 4.0","url":"https://creativecommons.org/licenses/by-nc/4.0/"},"generatedAt":"2026-11-05T16:28:47.402Z","url":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api","markdownUrl":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api.md","server":{"slug":"pipeworx-io-hpo-api","name":"Hpo Api","registryName":"io.github.pipeworx-io/hpo-api","description":"HPO API MCP.","registryStatus":"active","deletedAt":null,"statusMessage":null,"liveness":"live","publisher":{"class":"unknown","claimed":false}},"component":{"slug":"pipeworx-mcp-hpo-api","type":"npm","identifier":"@pipeworx/mcp-hpo-api","withdrawn":false,"url":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api","version":"0.2.1","transport":"stdio","scoredAt":"2026-11-05T05:18:44.912Z"},"score":{"total":81,"tier":"high trust","status":"scored","weekDelta":3,"history":[{"date":"2026-11-05","total":81},{"date":"2026-11-04","total":81},{"date":"2026-11-03","total":81},{"date":"2026-11-02","total":65},{"date":"2026-11-01","total":80},{"date":"2026-10-31","total":79},{"date":"2026-10-30","total":79},{"date":"2026-10-29","total":78}]},"categories":[{"name":"Supply Chain Security","score":100,"verdict":"pass","reasons":["No malware found by supply-chain analysis.","No known CVEs affecting this package version or its production dependencies.","No install/post-install scripts declared.","No production dependencies, so there is no dependency health to assess."],"codes":[{"code":"supplychain.malware_clean","args":{}},{"code":"cve.none","args":{}},{"code":"installscript.none","args":{}},{"code":"dephealth.no_dependencies","args":{"deps":"0","unhealthy":"0"}}]},{"name":"Provenance & Transparency","score":97,"verdict":"fail","reasons":["Source repository is publicly reachable at the declared URL.","Cryptographically verified build provenance (signed, bound to pipeworx-io/mcp-hpo-api).","Clear OSI-approved license (MIT).","Actively maintained (last published 3 days ago).","Disclosure check failed: no security disclosure policy was found in the source repository."],"codes":[{"code":"provenance.repo_verified","args":{}},{"code":"provenance.verified","args":{"repo":"pipeworx-io/mcp-hpo-api"}},{"code":"license.osi","args":{"spdx":"MIT"}},{"code":"maintenance.recent","args":{"age_days":"3"}},{"code":"disclosure.absent","args":{}}]},{"name":"Schema Quality & AI Usability","score":75,"verdict":"fail","reasons":["AI-judged instruction clarity (good).","Tool/resource definitions use about 673 tokens (~96/item across 7 items; 7 tools + 0 resources), lean.","Usage-examples check failed: none of the tools include examples."],"codes":[{"code":"schema.ai_quality","args":{"band":"good"}},{"code":"schema.footprint_lean","args":{"avg":"96","items":"7","tools":"7","tokens":"673","resources":"0"}},{"code":"schema.examples_absent","args":{}}]},{"name":"Stability & Change Management","score":23,"verdict":"partial","reasons":["Stability observed for 7 of 30 days with no destabilising changes; credit accrues until the full window elapses."],"codes":[{"code":"stability.building_history","args":{"days":"7"}}]},{"name":"Tool Coverage","score":67,"verdict":"fail","reasons":["100% of tools have a non-trivial description (not blank, and not just the tool's name).","0% of tool parameters carry a description."],"codes":[{"code":"toolquality.descriptions","args":{"pct":"100"}},{"code":"toolquality.param_docs","args":{"pct":"0"}}]},{"name":"Tool Safety","score":100,"verdict":"pass","reasons":["No prompt-injection markers were found in the server instructions, tool names or descriptions we captured.","We read all 7 captured tool definition(s), and no name or description among them implies an irreversible operation.","An AI judge read all 8 captured unit(s) of tool text and found none that tries to manipulate the model reading it."],"codes":[{"code":"toolsafety.injection_clean","args":{}},{"code":"toolsafety.destructive_none","args":{"tools":"7"}},{"code":"toolsafety.manipulation_clean","args":{"units":"8","judged":"8"}}]},{"name":"Capabilities","score":100,"verdict":"pass","reasons":["Implements a supported MCP spec version (2025-11-25); the latest is 2026-07-28."],"codes":[{"code":"protocol.supported","args":{"latest":"2026-07-28","version":"2025-11-25"}}]}],"inconclusive":[],"malware":[],"components":[{"slug":"hpo-api-mcp","type":"remote","identifier":"https://gateway.pipeworx.io/hpo-api/mcp","withdrawn":false,"score":63,"current":false,"url":"https://verifymcp.io/servers/pipeworx-io-hpo-api/hpo-api-mcp","markdownUrl":"https://verifymcp.io/servers/pipeworx-io-hpo-api/hpo-api-mcp.md"},{"slug":"pipeworx-mcp-hpo-api","type":"npm","identifier":"@pipeworx/mcp-hpo-api","withdrawn":false,"score":81,"current":true,"url":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api","markdownUrl":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api.md"}],"facts":[{"label":"Registry","value":"npm"},{"label":"Package","value":"@pipeworx/mcp-hpo-api"},{"label":"Version","value":"0.2.1"},{"label":"Transport","value":"stdio"}],"install":{"available":true,"bundleSha256":null},"tools":[{"name":"term","title":null,"description":"\"What does HP:[N] mean\" / \"look up HPO phenotype [ID]\" — fetch a single Human Phenotype Ontology (HPO) term by ID. 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Use to map clinical descriptions to standard ontology terms for rare-disease workups, genomics, or clinical phenotype databases.","inputs":[{"name":"limit","type":"number","required":false,"description":null},{"name":"page","type":"number","required":false,"description":null},{"name":"query","type":"string","required":true,"description":null}],"outputs":[],"hasOutputSchema":false,"hasExamples":false,"tokenEstimate":117},{"name":"term_children","title":null,"description":"\"More specific HPO phenotypes under [HP:N]\" / \"child terms of [phenotype]\" — direct children of an HPO term in the ontology graph. 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Use for exhaustive coverage (e.g. \"every cardiac phenotype\" via descendants of HP:0001626).","inputs":[{"name":"id","type":"string","required":true,"description":null}],"outputs":[],"hasOutputSchema":false,"hasExamples":false,"tokenEstimate":74},{"name":"gene_diseases","title":null,"description":"\"What diseases is gene [NCBIGene:N] associated with\" / \"diseases linked to gene [X]\" / \"TP53 disease associations\" — fetch diseases associated with a gene ID (NCBIGene:N format). Use for gene-to-disease lookups in rare-disease research, variant prioritization. Example ID: NCBIGene:7157 (TP53).","inputs":[{"name":"id","type":"string","required":true,"description":null}],"outputs":[],"hasOutputSchema":false,"hasExamples":false,"tokenEstimate":96},{"name":"disease_phenotypes","title":null,"description":"\"What symptoms / clinical features does [disease] cause\" / \"HPO phenotypes for [OMIM N]\" / \"clinical signs of [rare disease]\" — list HPO phenotype terms for a disease ID (OMIM:N, ORPHA:N, or MONDO:N format). Use to enumerate clinical features of rare diseases. Example ID: OMIM:154700 (Marfan syndrome).","inputs":[{"name":"id","type":"string","required":true,"description":null}],"outputs":[],"hasOutputSchema":false,"hasExamples":false,"tokenEstimate":98}],"toolsTruncatedAtCapture":false,"diagnostics":{"capturedAt":"2026-11-05T05:18:44.000Z","track":"package","endpoint":null,"declaredUrl":null,"truncated":false,"tls":null,"dnssec":null,"auth":null,"httpsRedirect":null,"transports":[],"provenance":{"outcome":"verified","label":"Verified","reason":"verified","reasonLabel":"Verified","discovery":"attestation_endpoint","discoveryLabel":"Registry attestation endpoint","sourceRepo":null,"attestationSkipped":null,"attestationSkippedLabel":null},"installScripts":[],"installScriptsTotal":null,"vulnerabilities":[],"vulnerabilitiesTotal":null,"dependencies":{"nodes":0,"partial":false,"deprecated":null,"stale":null,"noRepo":null}},"mismatches":[],"changelog":{"trackingSince":"2026-10-29","recent":[{"id":"chg_01a19fd4-24fb-79df-b19b-e475c72ae8a8","kind":"score.total_changed","summary":"Trust score (65 → 81)","materiality":"functional","direction":"improvement","scoreDelta":16,"occurredOn":"2026-11-03","url":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api#chg-chg_01a19fd4-24fb-79df-b19b-e475c72ae8a8"},{"id":"chg_01a19fd4-24f2-7230-a55a-0b9ab555c23b","kind":"check.reverified","summary":"Malware scan (unverified → pass)","materiality":"security","direction":"improvement","scoreDelta":null,"occurredOn":"2026-11-03","url":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api#chg-chg_01a19fd4-24f2-7230-a55a-0b9ab555c23b"},{"id":"chg_01a19a64-8df5-7c40-bfff-47bf7fc88740","kind":"check.unverifiable","summary":"Malware scan (pass → unverified)","materiality":"security","direction":"regression","scoreDelta":null,"occurredOn":"2026-11-02","url":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api#chg-chg_01a19a64-8df5-7c40-bfff-47bf7fc88740"},{"id":"chg_01a19a64-8df7-74a9-82a4-bd6047032965","kind":"package.version_changed","summary":"Package version (0.2.0 → 0.2.1)","materiality":"functional","direction":"neutral","scoreDelta":null,"occurredOn":"2026-11-02","url":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api#chg-chg_01a19a64-8df7-74a9-82a4-bd6047032965"},{"id":"chg_01a19a64-8df7-7d88-b403-7c86edd19986","kind":"score.total_changed","summary":"Trust score (80 → 65)","materiality":"functional","direction":"regression","scoreDelta":-15,"occurredOn":"2026-11-02","url":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api#chg-chg_01a19a64-8df7-7d88-b403-7c86edd19986"},{"id":"chg_01a19584-e0a1-71f5-a6d3-1cd8998d6776","kind":"score.total_changed","summary":"Trust score (79 → 80)","materiality":"functional","direction":"improvement","scoreDelta":1,"occurredOn":"2026-11-01","url":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api#chg-chg_01a19584-e0a1-71f5-a6d3-1cd8998d6776"},{"id":"chg_01a18b38-84c7-7945-baaf-20373cd5b052","kind":"score.total_changed","summary":"Trust score (78 → 79)","materiality":"functional","direction":"improvement","scoreDelta":1,"occurredOn":"2026-10-30","url":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api#chg-chg_01a18b38-84c7-7945-baaf-20373cd5b052"},{"id":"chg_01a1863b-e5d3-79c0-b887-6ab81cdac4cf","kind":"score.first_scored","summary":"First indexed and scored","materiality":"functional","direction":"neutral","scoreDelta":null,"occurredOn":"2026-10-29","url":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api#chg-chg_01a1863b-e5d3-79c0-b887-6ab81cdac4cf"},{"id":"chg_01a18615-fe51-7e79-9719-8b83560601d6","kind":"score.first_scored","summary":"First indexed and scored","materiality":"functional","direction":"neutral","scoreDelta":null,"occurredOn":"2026-10-29","url":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api#chg-chg_01a18615-fe51-7e79-9719-8b83560601d6"}],"truncated":false,"feedUrl":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api/changelog.json"},"links":{"html":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api","markdown":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api.md","changelogJson":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api/changelog.json","changelogRss":"https://verifymcp.io/servers/pipeworx-io-hpo-api/pipeworx-mcp-hpo-api.xml","external":[{"label":"npm package","href":"https://www.npmjs.com/package/@pipeworx/mcp-hpo-api"},{"label":"Socket report","href":"https://socket.dev/npm/package/@pipeworx/mcp-hpo-api"},{"label":"Repository","href":"https://github.com/pipeworx-io/mcp-hpo-api"},{"label":"Website","href":"https://pipeworx.io/packs/hpo-api"}]}}