{"$schema":"https://verifymcp.io/schemas/trust-report.json","schemaVersion":1,"license":{"name":"CC BY-NC 4.0","url":"https://creativecommons.org/licenses/by-nc/4.0/"},"generatedAt":"2026-11-05T19:30:28.213Z","url":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc","markdownUrl":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc.md","server":{"slug":"pipeworx-io-hgnc","name":"Hgnc","registryName":"io.github.pipeworx-io/hgnc","description":"HGNC (HUGO Gene Nomenclature Committee) MCP.","registryStatus":"active","deletedAt":null,"statusMessage":null,"liveness":"live","publisher":{"class":"unknown","claimed":false}},"component":{"slug":"pipeworx-mcp-hgnc","type":"npm","identifier":"@pipeworx/mcp-hgnc","withdrawn":false,"url":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc","version":"0.2.1","transport":"stdio","scoredAt":"2026-11-05T08:18:25.776Z"},"score":{"total":84,"tier":"high trust","status":"scored","weekDelta":4,"history":[{"date":"2026-11-05","total":84},{"date":"2026-11-04","total":83},{"date":"2026-11-03","total":83},{"date":"2026-11-02","total":67},{"date":"2026-11-01","total":80},{"date":"2026-10-31","total":80},{"date":"2026-10-30","total":80},{"date":"2026-10-29","total":80}]},"categories":[{"name":"Supply Chain Security","score":100,"verdict":"pass","reasons":["No malware found by supply-chain analysis.","No known CVEs affecting this package version or its production dependencies.","No install/post-install scripts declared.","No production dependencies, so there is no dependency health to assess."],"codes":[{"code":"supplychain.malware_clean","args":{}},{"code":"cve.none","args":{}},{"code":"installscript.none","args":{}},{"code":"dephealth.no_dependencies","args":{"deps":"0","unhealthy":"0"}}]},{"name":"Provenance & Transparency","score":97,"verdict":"fail","reasons":["Source repository is publicly reachable at the declared URL.","Cryptographically verified build provenance (signed, bound to pipeworx-io/mcp-hgnc).","Clear OSI-approved license (MIT).","Actively maintained (last published 3 days ago).","Disclosure check failed: no security disclosure policy was found in the source repository."],"codes":[{"code":"provenance.repo_verified","args":{}},{"code":"provenance.verified","args":{"repo":"pipeworx-io/mcp-hgnc"}},{"code":"license.osi","args":{"spdx":"MIT"}},{"code":"maintenance.recent","args":{"age_days":"3"}},{"code":"disclosure.absent","args":{}}]},{"name":"Schema Quality & AI Usability","score":72,"verdict":"fail","reasons":["AI-judged instruction clarity (good).","Context-footprint check failed: tool/resource definitions use about 461 tokens (~153/item across 3 items; 3 tools + 0 resources), over budget; trim descriptions and params.","Usage-examples check failed: none of the tools include examples."],"codes":[{"code":"schema.ai_quality","args":{"band":"good"}},{"code":"schema.footprint_heavy","args":{"avg":"153","items":"3","tools":"3","tokens":"461","resources":"0"}},{"code":"schema.examples_absent","args":{}}]},{"name":"Stability & Change Management","score":23,"verdict":"partial","reasons":["Stability observed for 7 of 30 days with no destabilising changes; credit accrues until the full window elapses."],"codes":[{"code":"stability.building_history","args":{"days":"7"}}]},{"name":"Tool Coverage","score":100,"verdict":"pass","reasons":["100% of tools have a non-trivial description (not blank, and not just the tool's name).","100% of tool parameters carry a description."],"codes":[{"code":"toolquality.descriptions","args":{"pct":"100"}},{"code":"toolquality.param_docs","args":{"pct":"100"}}]},{"name":"Tool Safety","score":100,"verdict":"pass","reasons":["No prompt-injection markers were found in the server instructions, tool names or descriptions we captured.","We read all 3 captured tool definition(s), and no name or description among them implies an irreversible operation.","An AI judge read all 4 captured unit(s) of tool text and found none that tries to manipulate the model reading it."],"codes":[{"code":"toolsafety.injection_clean","args":{}},{"code":"toolsafety.destructive_none","args":{"tools":"3"}},{"code":"toolsafety.manipulation_clean","args":{"units":"4","judged":"4"}}]},{"name":"Capabilities","score":100,"verdict":"pass","reasons":["Implements a supported MCP spec version (2025-11-25); the latest is 2026-07-28."],"codes":[{"code":"protocol.supported","args":{"latest":"2026-07-28","version":"2025-11-25"}}]}],"inconclusive":[],"malware":[],"components":[{"slug":"hgnc-mcp","type":"remote","identifier":"https://gateway.pipeworx.io/hgnc/mcp","withdrawn":false,"score":77,"current":false,"url":"https://verifymcp.io/servers/pipeworx-io-hgnc/hgnc-mcp","markdownUrl":"https://verifymcp.io/servers/pipeworx-io-hgnc/hgnc-mcp.md"},{"slug":"pipeworx-mcp-hgnc","type":"npm","identifier":"@pipeworx/mcp-hgnc","withdrawn":false,"score":84,"current":true,"url":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc","markdownUrl":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc.md"}],"facts":[{"label":"Registry","value":"npm"},{"label":"Package","value":"@pipeworx/mcp-hgnc"},{"label":"Version","value":"0.2.1"},{"label":"Transport","value":"stdio"}],"install":{"available":true,"bundleSha256":null},"tools":[{"name":"get_gene","title":null,"description":"Exact lookup of an approved human gene by its official HGNC symbol — returns the full authoritative record: approved name, locus type, chromosomal location, alias/previous symbols, gene groups, and cross-references (Entrez, Ensembl, UniProt, OMIM, RefSeq, UCSC, CCDS). Use search_genes first if you only have a name fragment or aren't sure of the exact symbol. Keyless.","inputs":[{"name":"symbol","type":"string","required":true,"description":"Official HGNC gene symbol, e.g. \"BRCA1\", \"TP53\", \"EGFR\"."}],"outputs":[],"hasOutputSchema":false,"hasExamples":false,"tokenEstimate":123},{"name":"search_genes","title":null,"description":"Fuzzy search across approved symbols, names, and aliases — e.g. \"breast cancer\", \"p53\", \"tumor protein\". Returns lightweight matches (hgnc_id, symbol, relevance score) ranked by score; call get_gene with a returned symbol for the full record. Keyless.","inputs":[{"name":"limit","type":"number","required":false,"description":"Max matches to return (default 10, max 25)."},{"name":"query","type":"string","required":true,"description":"Gene symbol, name fragment, or alias, e.g. \"breast cancer\", \"p53\", \"kinase\"."}],"outputs":[],"hasOutputSchema":false,"hasExamples":false,"tokenEstimate":121},{"name":"resolve_xref","title":null,"description":"Reverse-lookup: map an external database id to its canonical HGNC gene. \"What gene is Entrez 672?\" -> BRCA1. Accepts entrez_id, ensembl_gene_id, uniprot_ids, omim_id, refseq_accession, or ucsc_id and returns the same full record as get_gene. Keyless.","inputs":[{"name":"id","type":"string","required":true,"description":"The external id, e.g. entrez \"672\", ensembl \"ENSG00000012048\", uniprot \"P38398\", omim \"113705\"."},{"name":"id_type","type":"string","required":true,"description":"External id namespace: one of entrez_id, ensembl_gene_id, uniprot_ids, omim_id, refseq_accession, ucsc_id."}],"outputs":[],"hasOutputSchema":false,"hasExamples":false,"tokenEstimate":163}],"toolsTruncatedAtCapture":false,"diagnostics":{"capturedAt":"2026-11-05T08:18:25.000Z","track":"package","endpoint":null,"declaredUrl":null,"truncated":false,"tls":null,"dnssec":null,"auth":null,"httpsRedirect":null,"transports":[],"provenance":{"outcome":"verified","label":"Verified","reason":"verified","reasonLabel":"Verified","discovery":"attestation_endpoint","discoveryLabel":"Registry attestation endpoint","sourceRepo":null,"attestationSkipped":null,"attestationSkippedLabel":null},"installScripts":[],"installScriptsTotal":null,"vulnerabilities":[],"vulnerabilitiesTotal":null,"dependencies":{"nodes":0,"partial":false,"deprecated":null,"stale":null,"noRepo":null}},"mismatches":[],"changelog":{"trackingSince":"2026-10-29","recent":[{"id":"chg_01a1aac9-ab82-7483-a65c-b793560c3cb4","kind":"score.total_changed","summary":"Trust score (83 → 84)","materiality":"functional","direction":"improvement","scoreDelta":1,"occurredOn":"2026-11-05","url":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc#chg-chg_01a1aac9-ab82-7483-a65c-b793560c3cb4"},{"id":"chg_01a1a07b-aaa2-72f5-8fef-681c33a699df","kind":"score.total_changed","summary":"Trust score (67 → 83)","materiality":"functional","direction":"improvement","scoreDelta":16,"occurredOn":"2026-11-03","url":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc#chg-chg_01a1a07b-aaa2-72f5-8fef-681c33a699df"},{"id":"chg_01a1a07b-aa94-74a6-9c83-ad65d499cecc","kind":"check.reverified","summary":"Malware scan (unverified → pass)","materiality":"security","direction":"improvement","scoreDelta":null,"occurredOn":"2026-11-03","url":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc#chg-chg_01a1a07b-aa94-74a6-9c83-ad65d499cecc"},{"id":"chg_01a19a65-58e3-776c-9118-a018ef7880be","kind":"check.unverifiable","summary":"Malware scan (pass → unverified)","materiality":"security","direction":"regression","scoreDelta":null,"occurredOn":"2026-11-02","url":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc#chg-chg_01a19a65-58e3-776c-9118-a018ef7880be"},{"id":"chg_01a19a65-58e5-7624-9658-7812763fd00f","kind":"score.total_changed","summary":"Trust score (80 → 67)","materiality":"functional","direction":"regression","scoreDelta":-13,"occurredOn":"2026-11-02","url":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc#chg-chg_01a19a65-58e5-7624-9658-7812763fd00f"},{"id":"chg_01a19a65-58e5-7081-a5f6-e19fe98a0d74","kind":"package.version_changed","summary":"Package version (0.2.0 → 0.2.1)","materiality":"functional","direction":"neutral","scoreDelta":null,"occurredOn":"2026-11-02","url":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc#chg-chg_01a19a65-58e5-7081-a5f6-e19fe98a0d74"},{"id":"chg_01a19a65-58e4-7a4b-8424-9fd72f6e5c6a","kind":"check.reverified","summary":"Stability (unverified → 0.13)","materiality":"functional","direction":"improvement","scoreDelta":null,"occurredOn":"2026-11-02","url":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc#chg-chg_01a19a65-58e4-7a4b-8424-9fd72f6e5c6a"},{"id":"chg_01a18be2-d333-72ec-9edd-20472d1bfba8","kind":"check.reverified","summary":"Security disclosure (unverified → fail)","materiality":"functional","direction":"regression","scoreDelta":null,"occurredOn":"2026-10-30","url":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc#chg-chg_01a18be2-d333-72ec-9edd-20472d1bfba8"},{"id":"chg_01a18674-c496-7452-91be-cb8c8605c1c5","kind":"score.first_scored","summary":"First indexed and scored","materiality":"functional","direction":"neutral","scoreDelta":null,"occurredOn":"2026-10-29","url":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc#chg-chg_01a18674-c496-7452-91be-cb8c8605c1c5"}],"truncated":false,"feedUrl":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc/changelog.json"},"links":{"html":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc","markdown":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc.md","changelogJson":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc/changelog.json","changelogRss":"https://verifymcp.io/servers/pipeworx-io-hgnc/pipeworx-mcp-hgnc.xml","external":[{"label":"npm package","href":"https://www.npmjs.com/package/@pipeworx/mcp-hgnc"},{"label":"Socket report","href":"https://socket.dev/npm/package/@pipeworx/mcp-hgnc"},{"label":"Repository","href":"https://github.com/pipeworx-io/mcp-hgnc"},{"label":"Website","href":"https://pipeworx.io/packs/hgnc"}]}}